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References
- 1
-
A. V. Aho, D. S. Hirschberg, and J. D. Ullman.
Bounds on the complexity of the longest common subsequence problem.
J. ACM, 23:1-12, 1976.
- 2
-
A. V. Aho, J. E. Hopcroft, and J. D. Ullman.
The Design and Analysis of Computer Algorithms.
Addison-Wesley Pu. Co., Reading, MA, 1974.
- 3
-
A. V. Aho, J. E. Hopcroft, and J. D. Ullman.
Data Structures and Algorithms.
Addison-Wesley Pu. Co., Reading, MA, 1983.
- 4
-
L. Allison and T. I. Dix.
A bit string longest common subsequence algorithm.
Inf. Process. Lett., 23:305-310, 1986.
- 5
-
A. Apostolico.
Improving the worst-case performance of the Hunt-Szymanski strategy
for the longest common subsequence of two strings.
Inf. Process. Lett., 23:63-69, 1986.
- 6
-
A. Apostolico.
Remark on the Hsu-Du new algorithm for the longest common
subsequence problem.
Inf. Process. Lett., 25:235-236, 1987.
- 7
-
A. Apostolico and C. Guerra.
The longest common subsequence problem revisited.
Algorithmica, 2:315-336, 1987.
- 8
-
R. M. Baer and P. Brock.
Natural sorting over permutation spaces.
Math. Comp., 22:385-410, 1968.
- 9
-
V. Chvátal, D. A. Klarner, and D. E. Knuth.
Selected combinatorial research problems.
Technical Report STAN-CS-72-292, Computer Science Department,
Stanford University, 1972.
- 10
-
V. Chvátal and D. Sankoff.
Longest common subsequences of random sequences.
Technical Report STAN-CS-75-477, Computer Science Department,
Stanford University, 1975.
- 11
-
V. Chvátal and D. Sankoff.
Longest common subsequences of two random sequences.
J. Appl. Prob., 12:306-315, 1975.
- 12
-
M. Crochemore.
Longest common factor of two words.
In Proceedings of CAAP'87, Pisa, Italy, pages 26-36, 1987.
- 13
-
J. Deken.
Some limit results for longest common subsequences.
Discrete Math., 26:17-31, 1979.
- 14
-
M. L. Fredman.
On computing the length of longest increasing subsequences.
Discrete Math., 11:29-35, 1975.
- 15
-
J. Gallant, D. Maier, and J. A. Storer.
On finding minimal length superstrings.
J. Comput. Syst. Sci., 20:50-58, 1980.
- 16
-
P. A. V. Hall and G. R. Dowling.
Approximate string matching.
ACM Comput. Surv., 12:381-402, 1980.
- 17
-
J. J. Hebrard.
Distances sur les mots. Application à la recherche de motifs.
Thèse de 3e cycle, Université de Haute-Normandie, 1984.
- 18
-
P. Heckel.
A technique for isolating differences between files.
Commun. ACM, 21:264-268, 1978.
- 19
-
D. S. Hirschberg.
A linear space algorithm for computing maximal common subsequences.
Commun. ACM, 18:341-343, 1975.
- 20
-
D. S. Hirschberg.
Algorithms for the longest common subsequence problem.
J. ACM, 24:664-675, 1977.
- 21
-
D. S. Hirschberg.
An information theoretic lower bound for the longest common
subsequence problem.
Inf. Process. Lett., 7:40-41, 1978.
- 22
-
D. S. Hirschberg and L. L. Larmore.
The set lcs problem.
Algorithmica, 2:91-95, 1987.
- 23
-
W. J. Hsu and M. W. Du.
New algorithms for the LCS problem.
J. Comput. Syst. Sci., 29:133-152, 1984.
- 24
-
J. W. Hunt and M. D. McIlroy.
An algorithm for differential file comparison.
Technical Report #41, Computing Science, Bell Laboratories, 1976.
- 25
-
J. W. Hunt and T. G. Szymanski.
A fast algorithm for computing longest common subsequences.
Commun. ACM, 20:350-353, 1977.
- 26
-
D. E. Knuth.
The Art of Computer Programming, Vol. 3, Sorting and Searching.
Addison-Wesley Pu. Co., Reading, MA, 1973.
- 27
-
R. Lowrance and R. A. Wagner.
An extension of the string-to-string correction problem.
J. ACM, 22:177-183, 1975.
- 28
-
D. Maier.
The complexity of some problems on subsequences and supersequences.
J. ACM, 25:322-336, 1977.
- 29
-
W. J. Masek and M. S. Paterson.
A faster algorithm computing string edit distances.
J. Comput. Syst. Sci., 20:18-31, 1980.
- 30
-
K. Mehlhorn.
Data Structures and Algorithms 1: Sorting and Searching.
Springer-Verlag, Berlin, 1984.
- 31
-
W. Miller and E. W. Myers.
A file comparison program.
Software - Practice and Experience, 15:1025-1040, 1985.
- 32
-
A. Mukhopadhyay.
A fast algorithm for the longest common subsequence problem.
Information Sciences, 20:69-82, 1980.
- 33
-
N. Nakatsu, Y. Kambayashi, and S. Yajima.
A longest common subsequence algorithm suitable for similar text
strings.
Acta Inf., 18:171-179, 1982.
- 34
-
S. B. Needleman and C. D. Wunsch.
A general method applicable to the search for similarities in the
amino acid sequence of two proteins.
J. Molecular Biology, 48:443-453, 1970.
- 35
-
Y. Robert and M. Tchuente.
A systolic array for the longest common subsequence problem.
Inf. Process. Lett., 21:191-198, 19885.
- 36
-
D. Sankoff.
Matching sequences under deletion/insertion constraints.
Proc. Nat. Acad. Sci. U.S.A., 69:4-6, 1972.
- 37
-
D. Sankoff and J. B. Kruskal.
Time Warps, String Edits, and Macromolecules: the Theory and
Practice of Sequence Comparison.
Addison-Wesley Pu. Co., Reading, MA, 1983.
- 38
-
S. M. Selkow.
The tree to tree editing problem.
Inf. Process. Lett., 6:184-186, 1977.
- 39
-
P. H. Sellers.
An algorithm for the distance between two finite sequences.
J. Comb. Th. A, 16:253-258, 1974.
- 40
-
P. H. Sellers.
On the theory and computation of evolutionary distances.
SIAM J. Appl. Math., 26:787-793, 1974.
- 41
-
P. H. Sellers.
The theory and computation of evolutionary distances: pattern
recognition.
J. of Algorithms, 1:359-373, 1980.
- 42
-
T. G. Szymanski.
A special case of the maximal common subsequence problem.
Technical Report TR-170, Computer Science Lab., Princeton University,
1975.
- 43
-
W. F. Tichy.
The string-to-string correction problem with block moves.
ACM Trans. Comput. Syst., 2:309-321, 1984.
- 44
-
S. M. Ulam.
Some combinatorial problems studied experimentally on computing
machines.
In S. K. Zaremba, editor, Applications of Number Theory to
Numerical Analysis, pages 1-3, apa, 1972. Academic Press.
- 45
-
T. K. Vintsyuk.
Speech discrimination by dynamic programming.
Kibernetika, 4:81-88, 1968.
- 46
-
R. A. Wagner and M. J. Fischer.
The string-to-string correction problem.
J. ACM, 21:168-173, 1974.
- 47
-
C. K. Wong and A. K. Chandra.
Bounds for the string editing problem.
J. ACM, 23:13-16, 1976.
Imre Simon
Wed May 28 19:09:09 EST 1997